Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_33840 | ROP_33870 | ROP_33840 | ROP_33870 | Oxidoreductase. | Putative ABC transporter substrate-binding protein. | 0.465 |
ROP_33840 | gabP-5 | ROP_33840 | ROP_33850 | Oxidoreductase. | Protein synonym:GABA permease. | 0.449 |
ROP_33860 | ROP_33870 | ROP_33860 | ROP_33870 | Hypothetical membrane protein. | Putative ABC transporter substrate-binding protein. | 0.934 |
ROP_33860 | ROP_33880 | ROP_33860 | ROP_33880 | Hypothetical membrane protein. | Serine/threonine protein kinase. | 0.973 |
ROP_33860 | gabP-5 | ROP_33860 | ROP_33850 | Hypothetical membrane protein. | Protein synonym:GABA permease. | 0.611 |
ROP_33870 | ROP_33840 | ROP_33870 | ROP_33840 | Putative ABC transporter substrate-binding protein. | Oxidoreductase. | 0.465 |
ROP_33870 | ROP_33860 | ROP_33870 | ROP_33860 | Putative ABC transporter substrate-binding protein. | Hypothetical membrane protein. | 0.934 |
ROP_33870 | ROP_33880 | ROP_33870 | ROP_33880 | Putative ABC transporter substrate-binding protein. | Serine/threonine protein kinase. | 0.916 |
ROP_33870 | gabP-5 | ROP_33870 | ROP_33850 | Putative ABC transporter substrate-binding protein. | Protein synonym:GABA permease. | 0.615 |
ROP_33880 | ROP_33860 | ROP_33880 | ROP_33860 | Serine/threonine protein kinase. | Hypothetical membrane protein. | 0.973 |
ROP_33880 | ROP_33870 | ROP_33880 | ROP_33870 | Serine/threonine protein kinase. | Putative ABC transporter substrate-binding protein. | 0.916 |
ROP_33880 | gabP-5 | ROP_33880 | ROP_33850 | Serine/threonine protein kinase. | Protein synonym:GABA permease. | 0.607 |
gabP-5 | ROP_33840 | ROP_33850 | ROP_33840 | Protein synonym:GABA permease. | Oxidoreductase. | 0.449 |
gabP-5 | ROP_33860 | ROP_33850 | ROP_33860 | Protein synonym:GABA permease. | Hypothetical membrane protein. | 0.611 |
gabP-5 | ROP_33870 | ROP_33850 | ROP_33870 | Protein synonym:GABA permease. | Putative ABC transporter substrate-binding protein. | 0.615 |
gabP-5 | ROP_33880 | ROP_33850 | ROP_33880 | Protein synonym:GABA permease. | Serine/threonine protein kinase. | 0.607 |