Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_14030 | ROP_35160 | ROP_14030 | ROP_35160 | Putative serine/threonine protein kinase. | Hypothetical protein. | 0.846 |
ROP_14030 | ROP_35170 | ROP_14030 | ROP_35170 | Putative serine/threonine protein kinase. | Hypothetical protein. | 0.820 |
ROP_14030 | pknA | ROP_14030 | ROP_35120 | Putative serine/threonine protein kinase. | Protein synonym:protein kinase A. | 0.467 |
ROP_14030 | pknB | ROP_14030 | ROP_35110 | Putative serine/threonine protein kinase. | Protein synonym:protein kinase B. | 0.568 |
ROP_14030 | pknL | ROP_14030 | ROP_08390 | Putative serine/threonine protein kinase. | Protein synonym:protein kinase L. | 0.567 |
ROP_14030 | pstP | ROP_14030 | ROP_35150 | Putative serine/threonine protein kinase. | Protein synonym:phosphoprotein phosphatase. | 0.985 |
ROP_34640 | ROP_35160 | ROP_34640 | ROP_35160 | Hypothetical membrane protein. | Hypothetical protein. | 0.477 |
ROP_34640 | ROP_35170 | ROP_34640 | ROP_35170 | Hypothetical membrane protein. | Hypothetical protein. | 0.978 |
ROP_34640 | pbpA | ROP_34640 | ROP_35130 | Hypothetical membrane protein. | Penicillin-binding protein PbpA. | 0.497 |
ROP_35160 | ROP_14030 | ROP_35160 | ROP_14030 | Hypothetical protein. | Putative serine/threonine protein kinase. | 0.846 |
ROP_35160 | ROP_34640 | ROP_35160 | ROP_34640 | Hypothetical protein. | Hypothetical membrane protein. | 0.477 |
ROP_35160 | ROP_35170 | ROP_35160 | ROP_35170 | Hypothetical protein. | Hypothetical protein. | 0.964 |
ROP_35160 | ROP_44870 | ROP_35160 | ROP_44870 | Hypothetical protein. | Hypothetical protein. | 0.465 |
ROP_35160 | pbpA | ROP_35160 | ROP_35130 | Hypothetical protein. | Penicillin-binding protein PbpA. | 0.972 |
ROP_35160 | pknA | ROP_35160 | ROP_35120 | Hypothetical protein. | Protein synonym:protein kinase A. | 0.977 |
ROP_35160 | pknB | ROP_35160 | ROP_35110 | Hypothetical protein. | Protein synonym:protein kinase B. | 0.992 |
ROP_35160 | pknL | ROP_35160 | ROP_08390 | Hypothetical protein. | Protein synonym:protein kinase L. | 0.906 |
ROP_35160 | pstP | ROP_35160 | ROP_35150 | Hypothetical protein. | Protein synonym:phosphoprotein phosphatase. | 0.974 |
ROP_35160 | sucA | ROP_35160 | ROP_60710 | Hypothetical protein. | 2-oxoglutarate dehydrogenase E1 component; Protein synonym:alpha-ketoglutarate dehydrogenase. | 0.943 |
ROP_35170 | ROP_14030 | ROP_35170 | ROP_14030 | Hypothetical protein. | Putative serine/threonine protein kinase. | 0.820 |
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