Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_02760 | ROP_14770 | ROP_02760 | ROP_14770 | Hypothetical protein. | Hypothetical protein. | 0.433 |
ROP_02760 | ROP_36610 | ROP_02760 | ROP_36610 | Hypothetical protein. | Hypothetical protein. | 0.512 |
ROP_02760 | ROP_70410 | ROP_02760 | ROP_70410 | Hypothetical protein. | Hypothetical protein. | 0.418 |
ROP_05350 | ROP_14770 | ROP_05350 | ROP_14770 | Hypothetical protein. | Hypothetical protein. | 0.509 |
ROP_05350 | ROP_36610 | ROP_05350 | ROP_36610 | Hypothetical protein. | Hypothetical protein. | 0.602 |
ROP_05350 | ROP_70410 | ROP_05350 | ROP_70410 | Hypothetical protein. | Hypothetical protein. | 0.505 |
ROP_14770 | ROP_02760 | ROP_14770 | ROP_02760 | Hypothetical protein. | Hypothetical protein. | 0.433 |
ROP_14770 | ROP_05350 | ROP_14770 | ROP_05350 | Hypothetical protein. | Hypothetical protein. | 0.509 |
ROP_14770 | ROP_21410 | ROP_14770 | ROP_21410 | Hypothetical protein. | Hypothetical protein. | 0.402 |
ROP_14770 | ROP_36180 | ROP_14770 | ROP_36180 | Hypothetical protein. | Putative AraC family transcriptional regulator. | 0.452 |
ROP_14770 | ROP_36610 | ROP_14770 | ROP_36610 | Hypothetical protein. | Hypothetical protein. | 0.530 |
ROP_14770 | thyA | ROP_14770 | ROP_19620 | Hypothetical protein. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.813 |
ROP_21410 | ROP_14770 | ROP_21410 | ROP_14770 | Hypothetical protein. | Hypothetical protein. | 0.402 |
ROP_21410 | ROP_36610 | ROP_21410 | ROP_36610 | Hypothetical protein. | Hypothetical protein. | 0.459 |
ROP_21410 | ROP_70410 | ROP_21410 | ROP_70410 | Hypothetical protein. | Hypothetical protein. | 0.474 |
ROP_33300 | ROP_36610 | ROP_33300 | ROP_36610 | Hypothetical protein. | Hypothetical protein. | 0.437 |
ROP_36180 | ROP_14770 | ROP_36180 | ROP_14770 | Putative AraC family transcriptional regulator. | Hypothetical protein. | 0.452 |
ROP_36180 | ROP_36610 | ROP_36180 | ROP_36610 | Putative AraC family transcriptional regulator. | Hypothetical protein. | 0.441 |
ROP_36180 | ROP_70410 | ROP_36180 | ROP_70410 | Putative AraC family transcriptional regulator. | Hypothetical protein. | 0.407 |
ROP_36610 | ROP_02760 | ROP_36610 | ROP_02760 | Hypothetical protein. | Hypothetical protein. | 0.512 |
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