Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ROP_36670Putative serine/threonine protein kinase. (1087 aa)    
Predicted Functional Partners:
ROP_04050
Putative serine/threonine protein kinase.
 
   
 0.768
pstP
Protein synonym:phosphoprotein phosphatase.
  
   
 0.634
ROP_36660
Putative arylsulfatase.
       0.493
ROP_58150
Hypothetical protein.
  
  
 0.469
ROP_12590
Hypothetical protein.
 
  
 0.456
ROP_58360
Hypothetical membrane protein.
  
  
 0.445
ROP_50920
Putative regulatory protein.
 
  
 0.435
ROP_36640
Hypothetical protein.
  
    0.432
ROP_66690
Hypothetical protein.
 
   
 0.431
ROP_15930
Hypothetical protein.
  
    0.428
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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