Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_17890 | ROP_23940 | ROP_17890 | ROP_23940 | Putative F420-dependent oxidoreductase. | Hypothetical protein. | 0.726 |
ROP_17890 | ROP_36910 | ROP_17890 | ROP_36910 | Putative F420-dependent oxidoreductase. | Hypothetical protein. | 0.692 |
ROP_17890 | ROP_71850 | ROP_17890 | ROP_71850 | Putative F420-dependent oxidoreductase. | Hypothetical protein. | 0.649 |
ROP_17890 | fbiA | ROP_17890 | ROP_63740 | Putative F420-dependent oxidoreductase. | LPPG--FO 2-phopspho-L-lactate transferase; Protein synonym:lactyl-2-diphospho-5'-guanosine--7, 8-didemethyl-8-hydroxy-5-deazariboflavin 2-phospho-L-lactate transferase. | 0.737 |
ROP_17890 | fbiB | ROP_17890 | ROP_63730 | Putative F420-dependent oxidoreductase. | Coenzyme F420--glutamate ligase. | 0.734 |
ROP_19710 | ROP_23940 | ROP_19710 | ROP_23940 | Putative oxidoreductase. | Hypothetical protein. | 0.655 |
ROP_19710 | ROP_32530 | ROP_19710 | ROP_32530 | Putative oxidoreductase. | Hypothetical protein. | 0.575 |
ROP_19710 | ROP_36910 | ROP_19710 | ROP_36910 | Putative oxidoreductase. | Hypothetical protein. | 0.682 |
ROP_19710 | ROP_38980 | ROP_19710 | ROP_38980 | Putative oxidoreductase. | Putative oxidoreductase. | 0.726 |
ROP_19710 | ROP_71850 | ROP_19710 | ROP_71850 | Putative oxidoreductase. | Hypothetical protein. | 0.565 |
ROP_19710 | fbiA | ROP_19710 | ROP_63740 | Putative oxidoreductase. | LPPG--FO 2-phopspho-L-lactate transferase; Protein synonym:lactyl-2-diphospho-5'-guanosine--7, 8-didemethyl-8-hydroxy-5-deazariboflavin 2-phospho-L-lactate transferase. | 0.787 |
ROP_19710 | fbiB | ROP_19710 | ROP_63730 | Putative oxidoreductase. | Coenzyme F420--glutamate ligase. | 0.789 |
ROP_19710 | fdg | ROP_19710 | ROP_19180 | Putative oxidoreductase. | F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. | 0.586 |
ROP_23940 | ROP_17890 | ROP_23940 | ROP_17890 | Hypothetical protein. | Putative F420-dependent oxidoreductase. | 0.726 |
ROP_23940 | ROP_19710 | ROP_23940 | ROP_19710 | Hypothetical protein. | Putative oxidoreductase. | 0.655 |
ROP_23940 | ROP_32530 | ROP_23940 | ROP_32530 | Hypothetical protein. | Hypothetical protein. | 0.749 |
ROP_23940 | ROP_36910 | ROP_23940 | ROP_36910 | Hypothetical protein. | Hypothetical protein. | 0.746 |
ROP_23940 | ROP_38980 | ROP_23940 | ROP_38980 | Hypothetical protein. | Putative oxidoreductase. | 0.739 |
ROP_23940 | ROP_47850 | ROP_23940 | ROP_47850 | Hypothetical protein. | Putative F420-dependent oxidoreductase. | 0.727 |
ROP_23940 | ROP_71850 | ROP_23940 | ROP_71850 | Hypothetical protein. | Hypothetical protein. | 0.753 |
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