Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_15770 | ROP_39370 | ROP_15770 | ROP_39370 | Putative lipase. | Mycolyltransferase. | 0.757 |
ROP_15770 | ROP_51530 | ROP_15770 | ROP_51530 | Putative lipase. | Hypothetical protein. | 0.907 |
ROP_15770 | ROP_55070 | ROP_15770 | ROP_55070 | Putative lipase. | Putative glycosyltransferase. | 0.907 |
ROP_15770 | ROP_64340 | ROP_15770 | ROP_64340 | Putative lipase. | Putative lipase. | 0.923 |
ROP_35000 | ROP_39370 | ROP_35000 | ROP_39370 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | Mycolyltransferase. | 0.721 |
ROP_39370 | ROP_15770 | ROP_39370 | ROP_15770 | Mycolyltransferase. | Putative lipase. | 0.757 |
ROP_39370 | ROP_35000 | ROP_39370 | ROP_35000 | Mycolyltransferase. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. | 0.721 |
ROP_39370 | ROP_39400 | ROP_39370 | ROP_39400 | Mycolyltransferase. | Hypothetical protein. | 0.889 |
ROP_39370 | ROP_51470 | ROP_39370 | ROP_51470 | Mycolyltransferase. | Putative peptidase S1 family protein. | 0.736 |
ROP_39370 | ROP_51530 | ROP_39370 | ROP_51530 | Mycolyltransferase. | Hypothetical protein. | 0.900 |
ROP_39370 | ROP_55070 | ROP_39370 | ROP_55070 | Mycolyltransferase. | Putative glycosyltransferase. | 0.900 |
ROP_39370 | ROP_59850 | ROP_39370 | ROP_59850 | Mycolyltransferase. | Hypothetical protein. | 0.731 |
ROP_39370 | ROP_64340 | ROP_39370 | ROP_64340 | Mycolyltransferase. | Putative lipase. | 0.797 |
ROP_39370 | aftB | ROP_39370 | ROP_39350 | Mycolyltransferase. | Arabinosyltransferase AftB. | 0.766 |
ROP_39370 | aftC | ROP_39370 | ROP_68480 | Mycolyltransferase. | Arabinosyltransferase AftC. | 0.740 |
ROP_39400 | ROP_39370 | ROP_39400 | ROP_39370 | Hypothetical protein. | Mycolyltransferase. | 0.889 |
ROP_39400 | ROP_51470 | ROP_39400 | ROP_51470 | Hypothetical protein. | Putative peptidase S1 family protein. | 0.804 |
ROP_39400 | ROP_59850 | ROP_39400 | ROP_59850 | Hypothetical protein. | Hypothetical protein. | 0.795 |
ROP_39400 | ROP_64340 | ROP_39400 | ROP_64340 | Hypothetical protein. | Putative lipase. | 0.423 |
ROP_39400 | aftB | ROP_39400 | ROP_39350 | Hypothetical protein. | Arabinosyltransferase AftB. | 0.863 |
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