Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ROP_44690Putative oxidoreductase. (528 aa)    
Predicted Functional Partners:
ROP_44680
Putative acetolactate synthase large subunit; Belongs to the TPP enzyme family.
     
 0.704
ROP_44670
Hypothetical protein.
       0.676
ROP_22200
Hypothetical protein.
   
 0.547
hisD-2
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
     0.540
ROP_06720
Hypothetical protein.
   
 0.512
ROP_12280
Hypothetical protein.
   
 0.512
ROP_13780
Hypothetical protein.
   
 0.512
ROP_27920
Hypothetical protein.
   
 0.510
ROP_15960
Hypothetical protein.
   
 0.499
ROP_15970
Hypothetical membrane protein.
   
 0.499
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.