Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_07750 | ROP_07760 | ROP_07750 | ROP_07760 | Putative succinate dehydrogenase iron-sulfur protein. | Putative succinate dehydrogenase flavoprotein subunit. | 0.999 |
ROP_07750 | ROP_24960 | ROP_07750 | ROP_24960 | Putative succinate dehydrogenase iron-sulfur protein. | Putative oxidoreductase. | 0.904 |
ROP_07750 | ROP_44900 | ROP_07750 | ROP_44900 | Putative succinate dehydrogenase iron-sulfur protein. | Putative decarboxylase. | 0.903 |
ROP_07750 | maiA | ROP_07750 | ROP_34370 | Putative succinate dehydrogenase iron-sulfur protein. | Maleate cis-trans isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. | 0.903 |
ROP_07750 | sdhA | ROP_07750 | ROP_63050 | Putative succinate dehydrogenase iron-sulfur protein. | Succinate dehydrogenase flavoprotein subunit. | 0.992 |
ROP_07750 | sdhB | ROP_07750 | ROP_00670 | Putative succinate dehydrogenase iron-sulfur protein. | Succinate dehydrogenase iron-sulfur protein. | 0.909 |
ROP_07750 | sdhB-2 | ROP_07750 | ROP_63040 | Putative succinate dehydrogenase iron-sulfur protein. | Succinate dehydrogenase iron-sulfur protein. | 0.909 |
ROP_07750 | sdhC | ROP_07750 | ROP_63070 | Putative succinate dehydrogenase iron-sulfur protein. | Succinate dehydrogenase cytochrome b subunit. | 0.998 |
ROP_07750 | sdhD | ROP_07750 | ROP_63060 | Putative succinate dehydrogenase iron-sulfur protein. | Succinate dehydrogenase hydrophobic membrane anchor protein. | 0.994 |
ROP_07760 | ROP_07750 | ROP_07760 | ROP_07750 | Putative succinate dehydrogenase flavoprotein subunit. | Putative succinate dehydrogenase iron-sulfur protein. | 0.999 |
ROP_07760 | ROP_24960 | ROP_07760 | ROP_24960 | Putative succinate dehydrogenase flavoprotein subunit. | Putative oxidoreductase. | 0.911 |
ROP_07760 | ROP_44900 | ROP_07760 | ROP_44900 | Putative succinate dehydrogenase flavoprotein subunit. | Putative decarboxylase. | 0.908 |
ROP_07760 | maiA | ROP_07760 | ROP_34370 | Putative succinate dehydrogenase flavoprotein subunit. | Maleate cis-trans isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate. | 0.908 |
ROP_07760 | sdhA | ROP_07760 | ROP_63050 | Putative succinate dehydrogenase flavoprotein subunit. | Succinate dehydrogenase flavoprotein subunit. | 0.913 |
ROP_07760 | sdhB | ROP_07760 | ROP_00670 | Putative succinate dehydrogenase flavoprotein subunit. | Succinate dehydrogenase iron-sulfur protein. | 0.994 |
ROP_07760 | sdhB-2 | ROP_07760 | ROP_63040 | Putative succinate dehydrogenase flavoprotein subunit. | Succinate dehydrogenase iron-sulfur protein. | 0.994 |
ROP_07760 | sdhC | ROP_07760 | ROP_63070 | Putative succinate dehydrogenase flavoprotein subunit. | Succinate dehydrogenase cytochrome b subunit. | 0.995 |
ROP_07760 | sdhD | ROP_07760 | ROP_63060 | Putative succinate dehydrogenase flavoprotein subunit. | Succinate dehydrogenase hydrophobic membrane anchor protein. | 0.994 |
ROP_24960 | ROP_07750 | ROP_24960 | ROP_07750 | Putative oxidoreductase. | Putative succinate dehydrogenase iron-sulfur protein. | 0.904 |
ROP_24960 | ROP_07760 | ROP_24960 | ROP_07760 | Putative oxidoreductase. | Putative succinate dehydrogenase flavoprotein subunit. | 0.911 |
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