STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_45930Putative phosphotransferase. (344 aa)    
Predicted Functional Partners:
ROP_48460
Putative acyl-CoA dehydrogenase.
 
 0.981
ROP_71350
Putative acyl-CoA dehydrogenase.
 
 0.913
ROP_20530
Putative acyl-CoA dehydrogenase.
 
 0.868
ROP_12100
Putative acyl-CoA dehydrogenase.
 
 0.855
ROP_38350
Putative acyl-CoA dehydrogenase.
 
 0.854
ROP_45920
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.741
ROP_45910
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.664
ROP_45950
Putative fatty-acid--CoA ligase; Fragment.
  
 
 0.594
echA-4
enoyl-CoA hydratase.
  
 
 0.563
ROP_45940
Putative fatty-acid--CoA ligase; Fragment.
  
 
 0.527
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.