STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_47260Putative aldolase. (261 aa)    
Predicted Functional Partners:
ROP_67680
Putative fructose-specific phosphotransferase system enzyme II; Protein synonym:PTS fructose-specific EIIABC component; protein synonym:protein-Npi-phosphohistidine--sugar phosphotransferase.
  
  
 0.828
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
  
 0.767
ROP_13750
Hypothetical protein.
  
 0.716
ROP_03060
Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.575
ROP_21730
Hypothetical protein.
  
  
 0.575
ROP_25980
Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.575
ROP_28160
Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.575
ROP_28670
Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.575
ROP_28870
Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.575
ROP_30990
Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.575
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.