STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yrbE5APutative YrbE family protein. (254 aa)    
Predicted Functional Partners:
mce5F
Putative Mce family protein.
 
 
 0.983
mce5C
Putative Mce family protein.
 
 
 0.982
ROP_16520
Putative ABC transporter ATP-binding protein.
 0.980
ROP_18140
Putative ABC transporter ATP-binding protein.
 0.980
ROP_25320
Putative ABC transporter ATP-binding protein.
 0.980
ROP_46830
Putative ABC transporter ATP-binding protein.
 0.980
mce5D
Putative Mce family protein.
 
 
 0.965
mce5A
Putative Mce family protein.
 
 
 0.963
mce5B
Putative Mce family protein.
 
 
 0.963
mce5E
Putative Mce family protein.
 
 
 0.963
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.