STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_48470Oxidoreductase. (253 aa)    
Predicted Functional Partners:
ROP_48440
Putative acyl-CoA dehydrogenase.
 
 0.859
ROP_48460
Putative acyl-CoA dehydrogenase.
  
 0.843
ROP_48450
Putative phosphotransferase.
 
 
 0.839
ROP_48420
Hypothetical protein.
 
     0.828
ROP_48430
Putative acetyl-CoA acyltransferase; Protein synonym:acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.810
ROP_48410
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.779
ROP_46740
Putative oxidoreductase.
  
     0.747
ROP_48480
Oxidoreductase.
 
    
0.738
fas1
Fatty-acid synthase I.
  
 0.728
adh-2
Alcohol dehydrogenase.
   
 
 0.706
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.