STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_48500Putative acid--CoA ligase. (500 aa)    
Predicted Functional Partners:
ROP_60850
Putative fatty-acid--CoA ligase; Protein synonym:acyl-CoA synthetase.
  
     0.751
ROP_48480
Oxidoreductase.
 
 
 0.725
ROP_48410
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.716
ROP_19250
Putative non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.713
ROP_48510
Putative TetR family transcriptional regulator.
 
   
 0.688
ROP_45950
Putative fatty-acid--CoA ligase; Fragment.
 
   
 0.671
ROP_48430
Putative acetyl-CoA acyltransferase; Protein synonym:acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.671
ROP_19230
Putative non-ribosomal peptide synthetase.
  
 0.668
adh-2
Alcohol dehydrogenase.
  
 
 0.662
ROP_52970
Hypothetical protein.
  
     0.661
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.