Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ROP_06240 | ROP_08450 | Hypothetical protein. | Hypothetical protein. | 0.526 |
ROP_06240 | ROP_17200 | Hypothetical protein. | Hypothetical membrane protein. | 0.760 |
ROP_06240 | ROP_18230 | Hypothetical protein. | Putative heparin-binding hemagglutinin. | 0.588 |
ROP_06240 | ROP_38740 | Hypothetical protein. | Hypothetical protein. | 0.685 |
ROP_06240 | ROP_49090 | Hypothetical protein. | Hypothetical protein. | 0.715 |
ROP_06240 | ROP_56200 | Hypothetical protein. | Hypothetical protein. | 0.659 |
ROP_06240 | ROP_57000 | Hypothetical protein. | Hypothetical membrane protein. | 0.785 |
ROP_06240 | ROP_62360 | Hypothetical protein. | Hypothetical protein. | 0.676 |
ROP_06240 | ROP_67440 | Hypothetical protein. | Hypothetical membrane protein. | 0.683 |
ROP_08450 | ROP_06240 | Hypothetical protein. | Hypothetical protein. | 0.526 |
ROP_08450 | ROP_17200 | Hypothetical protein. | Hypothetical membrane protein. | 0.576 |
ROP_08450 | ROP_18230 | Hypothetical protein. | Putative heparin-binding hemagglutinin. | 0.469 |
ROP_08450 | ROP_38740 | Hypothetical protein. | Hypothetical protein. | 0.672 |
ROP_08450 | ROP_49090 | Hypothetical protein. | Hypothetical protein. | 0.656 |
ROP_08450 | ROP_56200 | Hypothetical protein. | Hypothetical protein. | 0.508 |
ROP_08450 | ROP_57000 | Hypothetical protein. | Hypothetical membrane protein. | 0.612 |
ROP_08450 | ROP_62360 | Hypothetical protein. | Hypothetical protein. | 0.504 |
ROP_08450 | ROP_67440 | Hypothetical protein. | Hypothetical membrane protein. | 0.694 |
ROP_17200 | ROP_06240 | Hypothetical membrane protein. | Hypothetical protein. | 0.760 |
ROP_17200 | ROP_08450 | Hypothetical membrane protein. | Hypothetical protein. | 0.576 |
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