STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_49870Hypothetical protein. (43 aa)    
Predicted Functional Partners:
fadB-3
Fatty oxidation complex alpha subunit; Multifunctional protein.
  
 0.845
fadB
Fatty oxidation complex alpha subunit; Multifunctional protein.
  
 0.839
fadB-2
Fatty oxidation complex alpha subunit; Multifunctional protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.839
ROP_68370
Putative fatty oxidation complex alpha subunit; Multifunctional protein.
  
 0.835
ROP_71230
Hypothetical protein.
 
 
 0.727
ROP_45220
Hypothetical protein.
 
 
 0.718
ROP_70900
Hypothetical protein.
 
 0.699
ROP_31740
Hypothetical protein.
 
 
 0.690
ROP_45390
enoyl-CoA hydratase/isomerase family protein.
 
 0.688
ROP_23610
enoyl-CoA hydratase/isomerase family protein.
 
 0.686
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.