STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accD-4Putative acetyl-CoA carboxylase beta chain; Protein synonym:carboxyltransferase. (497 aa)    
Predicted Functional Partners:
accD-2
Putative acetyl-CoA carboxylase beta chain; Protein synonym:carboxyltransferase.
 
0.999
accB
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.999
fas1
Fatty-acid synthase I.
  
  
 0.993
accC
acetyl-CoA carboxylase biotin carboxylase subunit.
 0.978
ROP_41490
Putative acyl-CoA carboxylase.
  
 
 0.977
accA-2
acyl-CoA carboxylase alpha chain; Protein synonym:biotin carboxylase/biotin carboxyl carrier protein.
 0.976
fabF
Protein synonym:beta-ketoacyl-ACP synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.968
fabF-2
Protein synonym:beta-ketoacyl-ACP synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.968
ROP_18530
Urea carboxylase.
 
 
 0.968
ROP_68910
Putative urea carboxylase.
  
 
 0.968
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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