STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_51570Putative MFS transporter. (482 aa)    
Predicted Functional Partners:
ROP_63530
Putative drug resistance efflux protein; Fragment.
 
   
 0.741
ROP_51580
Hypothetical membrane protein.
       0.543
ROP_67680
Putative fructose-specific phosphotransferase system enzyme II; Protein synonym:PTS fructose-specific EIIABC component; protein synonym:protein-Npi-phosphohistidine--sugar phosphotransferase.
  
 
 0.538
ROP_51590
Putative methyltransferase.
  
  
 0.501
ROP_22850
Hypothetical protein.
  
  
 0.436
ROP_05960
Putative hydrolase.
  
  
 0.424
ROP_54730
Putative hydrolase.
  
  
 0.424
ROP_08850
Putative drug resistance efflux protein.
 
   
 0.422
ROP_45060
Hypothetical protein.
 
     0.414
ROP_59870
Putative MarR family transcriptional regulator.
 
   
 0.406
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.