Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_41640 | ROP_54430 | ROP_41640 | ROP_54430 | Hypothetical protein. | Hypothetical protein. | 0.453 |
ROP_54410 | ROP_54430 | ROP_54410 | ROP_54430 | Putative TetR family transcriptional regulator. | Hypothetical protein. | 0.504 |
ROP_54410 | ROP_54440 | ROP_54410 | ROP_54440 | Putative TetR family transcriptional regulator. | Hypothetical protein. | 0.515 |
ROP_54410 | dcd | ROP_54410 | ROP_54420 | Putative TetR family transcriptional regulator. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.796 |
ROP_54430 | ROP_41640 | ROP_54430 | ROP_41640 | Hypothetical protein. | Hypothetical protein. | 0.453 |
ROP_54430 | ROP_54410 | ROP_54430 | ROP_54410 | Hypothetical protein. | Putative TetR family transcriptional regulator. | 0.504 |
ROP_54430 | ROP_54440 | ROP_54430 | ROP_54440 | Hypothetical protein. | Hypothetical protein. | 0.853 |
ROP_54430 | ROP_54450 | ROP_54430 | ROP_54450 | Hypothetical protein. | Hypothetical protein; Belongs to the peptidase S1B family. | 0.572 |
ROP_54430 | ROP_54460 | ROP_54430 | ROP_54460 | Hypothetical protein. | Hypothetical protein. | 0.502 |
ROP_54430 | dcd | ROP_54430 | ROP_54420 | Hypothetical protein. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.521 |
ROP_54440 | ROP_54410 | ROP_54440 | ROP_54410 | Hypothetical protein. | Putative TetR family transcriptional regulator. | 0.515 |
ROP_54440 | ROP_54430 | ROP_54440 | ROP_54430 | Hypothetical protein. | Hypothetical protein. | 0.853 |
ROP_54440 | ROP_54450 | ROP_54440 | ROP_54450 | Hypothetical protein. | Hypothetical protein; Belongs to the peptidase S1B family. | 0.589 |
ROP_54440 | ROP_54460 | ROP_54440 | ROP_54460 | Hypothetical protein. | Hypothetical protein. | 0.616 |
ROP_54440 | dcd | ROP_54440 | ROP_54420 | Hypothetical protein. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.514 |
ROP_54450 | ROP_54430 | ROP_54450 | ROP_54430 | Hypothetical protein; Belongs to the peptidase S1B family. | Hypothetical protein. | 0.572 |
ROP_54450 | ROP_54440 | ROP_54450 | ROP_54440 | Hypothetical protein; Belongs to the peptidase S1B family. | Hypothetical protein. | 0.589 |
ROP_54450 | ROP_54460 | ROP_54450 | ROP_54460 | Hypothetical protein; Belongs to the peptidase S1B family. | Hypothetical protein. | 0.727 |
ROP_54460 | ROP_54430 | ROP_54460 | ROP_54430 | Hypothetical protein. | Hypothetical protein. | 0.502 |
ROP_54460 | ROP_54440 | ROP_54460 | ROP_54440 | Hypothetical protein. | Hypothetical protein. | 0.616 |
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