STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_55690Hypothetical protein. (180 aa)    
Predicted Functional Partners:
ROP_27840
Putative MarR family transcriptional regulator.
 
     0.553
ROP_67800
Hypothetical protein.
 
     0.553
mshD
Acetyltransferase MshD; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
 
  
 0.482
ROP_63350
Hypothetical protein.
 
     0.461
ROP_00910
Hypothetical protein.
  
     0.455
ROP_04490
Putative Xre family DNA-binding protein.
 
   
 0.451
ROP_27790
Hypothetical protein.
 
   
 0.431
ROP_41140
Hypothetical protein.
 
     0.426
ROP_51200
Hypothetical protein.
 
     0.417
ROP_55700
Hypothetical protein.
       0.416
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.