STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_57360Putative DeoR family transcriptional regulator. (322 aa)    
Predicted Functional Partners:
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.643
ROP_57370
Hypothetical protein.
 
     0.593
ROP_67800
Hypothetical protein.
 
    0.531
ROP_35220
Putative AraC family transcriptional regulator.
 
    0.524
ROP_57350
Hypothetical membrane protein.
       0.518
ROP_41150
Putative AraC family transcriptional regulator.
 
    0.501
ROP_67680
Putative fructose-specific phosphotransferase system enzyme II; Protein synonym:PTS fructose-specific EIIABC component; protein synonym:protein-Npi-phosphohistidine--sugar phosphotransferase.
  
  
 0.417
ROP_57460
Putative ABC transporter ATP-binding protein.
       0.415
ROP_52700
Hypothetical protein.
 
    0.413
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.