STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_58790Putative enoyl-CoA hydratase. (290 aa)    
Predicted Functional Partners:
ROP_47520
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.972
ROP_24810
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.967
ROP_51230
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.966
ROP_58520
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.965
ROP_58780
Putative acyl-CoA dehydrogenase.
 
 0.954
ROP_47940
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 0.948
ROP_23660
Putative 3-oxoacyl-[acyl-carrier-protein] reductase; Protein synonym:3-ketoacyl-ACP reductase.
 0.945
fabG-2
Protein synonym:3-ketoacyl-ACP reductase.
 
 0.933
fabG-3
Protein synonym:3-ketoacyl-ACP reductase.
 
 0.933
ROP_51840
Oxidoreductase.
 
 0.933
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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