Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ROP_19880 | ROP_60190 | Putative ABC transporter permease protein. | Hypothetical protein. | 0.494 |
ROP_25940 | ROP_60190 | Hypothetical protein. | Hypothetical protein. | 0.518 |
ROP_39340 | ROP_56540 | Hypothetical membrane protein; Belongs to the UbiA prenyltransferase family. | Hypothetical protein. | 0.489 |
ROP_39340 | ROP_60190 | Hypothetical membrane protein; Belongs to the UbiA prenyltransferase family. | Hypothetical protein. | 0.436 |
ROP_39340 | ROP_66490 | Hypothetical membrane protein; Belongs to the UbiA prenyltransferase family. | Putative magnesium chelatase subunit. | 0.700 |
ROP_41140 | ROP_60190 | Hypothetical protein. | Hypothetical protein. | 0.498 |
ROP_52360 | ROP_60190 | Hypothetical protein. | Hypothetical protein. | 0.552 |
ROP_52360 | ROP_66490 | Hypothetical protein. | Putative magnesium chelatase subunit. | 0.410 |
ROP_52360 | ROP_67830 | Hypothetical protein. | Hypothetical protein. | 0.404 |
ROP_56540 | ROP_39340 | Hypothetical protein. | Hypothetical membrane protein; Belongs to the UbiA prenyltransferase family. | 0.489 |
ROP_56540 | ROP_60190 | Hypothetical protein. | Hypothetical protein. | 0.738 |
ROP_56540 | ROP_66490 | Hypothetical protein. | Putative magnesium chelatase subunit. | 0.972 |
ROP_60180 | ROP_60190 | Putative CdaR family transcriptional regulator. | Hypothetical protein. | 0.480 |
ROP_60190 | ROP_19880 | Hypothetical protein. | Putative ABC transporter permease protein. | 0.494 |
ROP_60190 | ROP_25940 | Hypothetical protein. | Hypothetical protein. | 0.518 |
ROP_60190 | ROP_39340 | Hypothetical protein. | Hypothetical membrane protein; Belongs to the UbiA prenyltransferase family. | 0.436 |
ROP_60190 | ROP_41140 | Hypothetical protein. | Hypothetical protein. | 0.498 |
ROP_60190 | ROP_52360 | Hypothetical protein. | Hypothetical protein. | 0.552 |
ROP_60190 | ROP_56540 | Hypothetical protein. | Hypothetical protein. | 0.738 |
ROP_60190 | ROP_60180 | Hypothetical protein. | Putative CdaR family transcriptional regulator. | 0.480 |
page 1 of 2