ROP_60640 protein (Rhodococcus opacus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ROP_60640

Putative ABC transporter substrate-binding protein. (331 aa)

Predicted Functional Partners:

ROP_60630

0.996

ROP_60610

0.995

ROP_60620

0.994

ROP_08870

0.988

ROP_23140

0.985

ROP_08880

0.984

ROP_08890

0.978

ROP_23160

0.978

ROP_23150

0.977

ROP_60650

0.791

Your Current Organism:

Rhodococcus opacus

NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ROP_08870	ROP_08880	Putative ABC transporter permease protein.	Putative ABC transporter ATP-binding protein.	0.997
ROP_08870	ROP_08890	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.918
ROP_08870	ROP_23140	Putative ABC transporter permease protein.	Putative ABC transporter ATP-binding protein.	0.979
ROP_08870	ROP_60630	Putative ABC transporter permease protein.	Putative ABC transporter ATP-binding protein.	0.980
ROP_08870	ROP_60640	Putative ABC transporter permease protein.	Putative ABC transporter substrate-binding protein.	0.988
ROP_08870	ROP_60650	Putative ABC transporter permease protein.	Putative ABC transporter substrate-binding protein.	0.951
ROP_08880	ROP_08870	Putative ABC transporter ATP-binding protein.	Putative ABC transporter permease protein.	0.997
ROP_08880	ROP_08890	Putative ABC transporter ATP-binding protein.	Putative ABC transporter permease protein.	0.997
ROP_08880	ROP_23140	Putative ABC transporter ATP-binding protein.	Putative ABC transporter ATP-binding protein.	0.908
ROP_08880	ROP_23150	Putative ABC transporter ATP-binding protein.	Putative ABC transporter permease protein.	0.986
ROP_08880	ROP_23160	Putative ABC transporter ATP-binding protein.	Putative ABC transporter permease protein.	0.980
ROP_08880	ROP_60610	Putative ABC transporter ATP-binding protein.	Putative ABC transporter permease protein.	0.980
ROP_08880	ROP_60620	Putative ABC transporter ATP-binding protein.	Putative ABC transporter permease protein.	0.987
ROP_08880	ROP_60630	Putative ABC transporter ATP-binding protein.	Putative ABC transporter ATP-binding protein.	0.909
ROP_08880	ROP_60640	Putative ABC transporter ATP-binding protein.	Putative ABC transporter substrate-binding protein.	0.984
ROP_08880	ROP_60650	Putative ABC transporter ATP-binding protein.	Putative ABC transporter substrate-binding protein.	0.969
ROP_08890	ROP_08870	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.918
ROP_08890	ROP_08880	Putative ABC transporter permease protein.	Putative ABC transporter ATP-binding protein.	0.997
ROP_08890	ROP_23140	Putative ABC transporter permease protein.	Putative ABC transporter ATP-binding protein.	0.979
ROP_08890	ROP_60620	Putative ABC transporter permease protein.	Putative ABC transporter permease protein.	0.773