Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_61390 | ROP_61400 | ROP_61390 | ROP_61400 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.978 |
ROP_61390 | ROP_61410 | ROP_61390 | ROP_61410 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Putative ethanolamine permease. | 0.620 |
ROP_61390 | eutB | ROP_61390 | ROP_61420 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Ethanolamine ammonia-lyase large subunit. | 0.824 |
ROP_61390 | eutC | ROP_61390 | ROP_61430 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Ethanolamine ammonia-lyase small subunit; Belongs to the EutC family. | 0.810 |
ROP_61400 | ROP_61390 | ROP_61400 | ROP_61390 | Hypothetical protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.978 |
ROP_61400 | ROP_61410 | ROP_61400 | ROP_61410 | Hypothetical protein. | Putative ethanolamine permease. | 0.709 |
ROP_61400 | eutB | ROP_61400 | ROP_61420 | Hypothetical protein. | Ethanolamine ammonia-lyase large subunit. | 0.807 |
ROP_61400 | eutC | ROP_61400 | ROP_61430 | Hypothetical protein. | Ethanolamine ammonia-lyase small subunit; Belongs to the EutC family. | 0.807 |
ROP_61410 | ROP_61390 | ROP_61410 | ROP_61390 | Putative ethanolamine permease. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.620 |
ROP_61410 | ROP_61400 | ROP_61410 | ROP_61400 | Putative ethanolamine permease. | Hypothetical protein. | 0.709 |
ROP_61410 | ROP_61440 | ROP_61410 | ROP_61440 | Putative ethanolamine permease. | Hypothetical protein. | 0.568 |
ROP_61410 | aglA | ROP_61410 | ROP_11040 | Putative ethanolamine permease. | Alpha-glucosidase. | 0.555 |
ROP_61410 | aglA-2 | ROP_61410 | ROP_41880 | Putative ethanolamine permease. | Alpha-glucosidase. | 0.555 |
ROP_61410 | eutB | ROP_61410 | ROP_61420 | Putative ethanolamine permease. | Ethanolamine ammonia-lyase large subunit. | 0.953 |
ROP_61410 | eutC | ROP_61410 | ROP_61430 | Putative ethanolamine permease. | Ethanolamine ammonia-lyase small subunit; Belongs to the EutC family. | 0.953 |
ROP_61410 | glgE | ROP_61410 | ROP_11570 | Putative ethanolamine permease. | Putative glucanase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.615 |
ROP_61410 | treS | ROP_61410 | ROP_44790 | Putative ethanolamine permease. | Trehalose synthase; Protein synonym:maltose alpha-D-glucosyltransferase. | 0.555 |
ROP_61410 | treS-2 | ROP_61410 | ROP_61000 | Putative ethanolamine permease. | Trehalose synthase; Protein synonym:maltose alpha-D-glucosyltransferase. | 0.555 |
ROP_61440 | ROP_61410 | ROP_61440 | ROP_61410 | Hypothetical protein. | Putative ethanolamine permease. | 0.568 |
ROP_61440 | eutB | ROP_61440 | ROP_61420 | Hypothetical protein. | Ethanolamine ammonia-lyase large subunit. | 0.568 |
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