STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_62230Putative FtsK/SpoIIIE family protein. (1333 aa)    
Predicted Functional Partners:
ROP_62200
Hypothetical protein.
 
 
 0.999
ROP_62250
Hypothetical protein; Belongs to the WXG100 family.
  
 
 0.987
ROP_62220
Hypothetical membrane protein.
 
 
 0.973
ROP_62210
Subtilisin family peptidase; Belongs to the peptidase S8 family.
 
 
 0.962
ROP_62240
Hypothetical membrane protein.
  
  
 0.952
ROP_62260
Hypothetical protein; Belongs to the WXG100 family.
 
 
 0.943
ftsQ
Putative cell division protein FtsQ; Essential cell division protein.
 
 
 0.702
ROP_10130
Putative ComEC/Rec2-related protein.
 
  
 0.619
ROP_66230
Putative M50B family peptidase.
 
  
 0.558
dnaQ
Putative DNA polymerase III epsilon subunit.
 
   
 0.537
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.