STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_64340Putative lipase. (425 aa)    
Predicted Functional Partners:
lip
Triacylglycerol lipase.
 
 
 0.955
lip-3
Triacylglycerol lipase.
 
 
 0.954
ROP_17810
Putative lipase; Fragment.
 
 
 0.942
ROP_43380
Putative triacylglycerol lipase.
 
 
 0.941
ROP_48190
Putative lipase.
  
  
 
0.925
ROP_15770
Putative lipase.
 
  
 
0.923
ROP_20750
Putative esterase.
  
 
 0.913
ROP_51530
Hypothetical protein.
    
 0.907
ROP_55070
Putative glycosyltransferase.
  
 
  0.907
ROP_39360
Mycolyltransferase.
 
 
 0.814
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
Server load: low (20%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.