STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_65490Putative IclR family transcriptional regulator. (233 aa)    
Predicted Functional Partners:
ROP_65480
Hypothetical protein.
       0.860
leuC-2
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
  
 0.786
ROP_37510
Putative IclR family transcriptional regulator.
  
     0.764
ROP_15080
Putative IclR family transcriptional regulator.
  
     0.761
ROP_28630
Putative IclR family transcriptional regulator.
  
     0.760
ROP_46410
Putative IclR family transcriptional regulator.
  
     0.759
ROP_34190
Putative IclR family transcriptional regulator.
  
     0.755
ROP_57510
Putative IclR family transcriptional regulator.
  
     0.749
ROP_23050
Putative IclR family transcriptional regulator.
  
     0.748
ROP_58560
Putative IclR family transcriptional regulator.
  
     0.744
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.