STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_65640enoyl-CoA hydratase/isomerase family protein. (262 aa)    
Predicted Functional Partners:
paaN
Phenylacetic acid degradation protein PaaN.
  
 0.947
ROP_45390
enoyl-CoA hydratase/isomerase family protein.
 
  
 0.857
ROP_47500
Putative enoyl-CoA hydratase.
 
  
 0.857
echA-6
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.790
ROP_38190
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.789
ROP_71000
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.788
echA-2
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
0.775
ROP_16110
Putative enoyl-CoA hydratase.
 
  
0.772
ROP_47870
Putative enoyl-CoA hydratase.
 
  
0.772
paaJ
Putative phenylacetate-CoA oxygenase subunit PaaJ; Protein synonym:phenylacetic acid degradation protein.
 
 
 0.769
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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