Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_22960 | ROP_33750 | ROP_22960 | ROP_33750 | Malate dehydrogenase; Protein synonym:malic enzyme. | Malate dehydrogenase; Protein synonym:malic enzyme. | 0.905 |
ROP_22960 | ROP_60600 | ROP_22960 | ROP_60600 | Malate dehydrogenase; Protein synonym:malic enzyme. | Malate dehydrogenase; Protein synonym:malic enzyme. | 0.905 |
ROP_22960 | ROP_66180 | ROP_22960 | ROP_66180 | Malate dehydrogenase; Protein synonym:malic enzyme. | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | 0.410 |
ROP_31310 | ROP_66180 | ROP_31310 | ROP_66180 | Hypothetical protein. | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | 0.456 |
ROP_33750 | ROP_22960 | ROP_33750 | ROP_22960 | Malate dehydrogenase; Protein synonym:malic enzyme. | Malate dehydrogenase; Protein synonym:malic enzyme. | 0.905 |
ROP_33750 | ROP_60600 | ROP_33750 | ROP_60600 | Malate dehydrogenase; Protein synonym:malic enzyme. | Malate dehydrogenase; Protein synonym:malic enzyme. | 0.900 |
ROP_33750 | ROP_66180 | ROP_33750 | ROP_66180 | Malate dehydrogenase; Protein synonym:malic enzyme. | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | 0.410 |
ROP_47260 | ROP_66180 | ROP_47260 | ROP_66180 | Putative aldolase. | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | 0.575 |
ROP_47260 | ROP_67680 | ROP_47260 | ROP_67680 | Putative aldolase. | Putative fructose-specific phosphotransferase system enzyme II; Protein synonym:PTS fructose-specific EIIABC component; protein synonym:protein-Npi-phosphohistidine--sugar phosphotransferase. | 0.828 |
ROP_60600 | ROP_22960 | ROP_60600 | ROP_22960 | Malate dehydrogenase; Protein synonym:malic enzyme. | Malate dehydrogenase; Protein synonym:malic enzyme. | 0.905 |
ROP_60600 | ROP_33750 | ROP_60600 | ROP_33750 | Malate dehydrogenase; Protein synonym:malic enzyme. | Malate dehydrogenase; Protein synonym:malic enzyme. | 0.900 |
ROP_60600 | ROP_66180 | ROP_60600 | ROP_66180 | Malate dehydrogenase; Protein synonym:malic enzyme. | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | 0.410 |
ROP_66180 | ROP_22960 | ROP_66180 | ROP_22960 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Malate dehydrogenase; Protein synonym:malic enzyme. | 0.410 |
ROP_66180 | ROP_31310 | ROP_66180 | ROP_31310 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Hypothetical protein. | 0.456 |
ROP_66180 | ROP_33750 | ROP_66180 | ROP_33750 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Malate dehydrogenase; Protein synonym:malic enzyme. | 0.410 |
ROP_66180 | ROP_47260 | ROP_66180 | ROP_47260 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Putative aldolase. | 0.575 |
ROP_66180 | ROP_60600 | ROP_66180 | ROP_60600 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Malate dehydrogenase; Protein synonym:malic enzyme. | 0.410 |
ROP_66180 | ROP_66190 | ROP_66180 | ROP_66190 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Hypothetical membrane protein. | 0.587 |
ROP_66180 | ROP_67680 | ROP_66180 | ROP_67680 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Putative fructose-specific phosphotransferase system enzyme II; Protein synonym:PTS fructose-specific EIIABC component; protein synonym:protein-Npi-phosphohistidine--sugar phosphotransferase. | 0.503 |
ROP_66180 | rlmN | ROP_66180 | ROP_66200 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Putative rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.472 |
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