STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_66580Putative two-component histidine kinase. (538 aa)    
Predicted Functional Partners:
ROP_66570
Putative CriR family two-component response regulator.
 
   
 0.941
ROP_66590
Hypothetical protein.
 
   
 0.889
ROP_66600
Hypothetical membrane protein.
 
   
 0.882
ROP_66610
Hypothetical membrane protein.
 
   
 0.853
ROP_49050
Putative CriR family two-component response regulator.
 
   
 0.809
ROP_28430
Hypothetical protein.
  
 0.704
acoB
Putative acetoin dehydrogenase E1 component beta subunit.
  
 0.703
acoA
Putative acetoin dehydrogenase E1 component alpha subunit.
  
 0.703
ROP_66620
Putative Usp family protein.
 
   
 0.675
mprA
Two-component response regulator MprA.
 
 
 0.665
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.