STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpD-2Putative glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (514 aa)    
Predicted Functional Partners:
glpk
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 0.994
gpsA-2
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Protein synonym:dihydroxyacetone-phosphate reductase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.946
gpsA
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Protein synonym:dihydroxyacetone-phosphate reductase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.943
ROP_67470
Putative TetR family transcriptional regulator.
 
   
 0.930
glpD
Putative glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
0.922
ROP_51530
Hypothetical protein.
 
  
 0.918
plsB
Putative glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
    
 0.917
ROP_67490
Putative glycosyltransferase.
       0.868
dak
Dihydroxyacetone kinase.
 
  
 0.865
ROP_08430
Putative acyltransferase.
  
 
 0.829
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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