Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_14420 | ROP_24350 | ROP_14420 | ROP_24350 | Putative oxidoreductase. | Putative oxidoreductase. | 0.446 |
ROP_14420 | ROP_45320 | ROP_14420 | ROP_45320 | Putative oxidoreductase. | Putative oxidoreductase. | 0.418 |
ROP_14420 | ROP_46580 | ROP_14420 | ROP_46580 | Putative oxidoreductase. | Oxidoreductase. | 0.421 |
ROP_14420 | ROP_49670 | ROP_14420 | ROP_49670 | Putative oxidoreductase. | Putative oxidoreductase. | 0.435 |
ROP_14420 | ROP_69460 | ROP_14420 | ROP_69460 | Putative oxidoreductase. | Oxidoreductase. | 0.739 |
ROP_14420 | ROP_71470 | ROP_14420 | ROP_71470 | Putative oxidoreductase. | Oxidoreductase. | 0.795 |
ROP_24350 | ROP_14420 | ROP_24350 | ROP_14420 | Putative oxidoreductase. | Putative oxidoreductase. | 0.446 |
ROP_24350 | ROP_69460 | ROP_24350 | ROP_69460 | Putative oxidoreductase. | Oxidoreductase. | 0.678 |
ROP_24350 | fas1 | ROP_24350 | ROP_11350 | Putative oxidoreductase. | Fatty-acid synthase I. | 0.728 |
ROP_45320 | ROP_14420 | ROP_45320 | ROP_14420 | Putative oxidoreductase. | Putative oxidoreductase. | 0.418 |
ROP_45320 | ROP_69460 | ROP_45320 | ROP_69460 | Putative oxidoreductase. | Oxidoreductase. | 0.666 |
ROP_45320 | fas1 | ROP_45320 | ROP_11350 | Putative oxidoreductase. | Fatty-acid synthase I. | 0.728 |
ROP_46580 | ROP_14420 | ROP_46580 | ROP_14420 | Oxidoreductase. | Putative oxidoreductase. | 0.421 |
ROP_46580 | ROP_69460 | ROP_46580 | ROP_69460 | Oxidoreductase. | Oxidoreductase. | 0.649 |
ROP_46580 | fas1 | ROP_46580 | ROP_11350 | Oxidoreductase. | Fatty-acid synthase I. | 0.728 |
ROP_49670 | ROP_14420 | ROP_49670 | ROP_14420 | Putative oxidoreductase. | Putative oxidoreductase. | 0.435 |
ROP_49670 | ROP_69460 | ROP_49670 | ROP_69460 | Putative oxidoreductase. | Oxidoreductase. | 0.664 |
ROP_49670 | fas1 | ROP_49670 | ROP_11350 | Putative oxidoreductase. | Fatty-acid synthase I. | 0.728 |
ROP_61290 | ROP_61300 | ROP_61290 | ROP_61300 | Hypothetical protein. | Hypothetical protein. | 0.996 |
ROP_61290 | ROP_69460 | ROP_61290 | ROP_69460 | Hypothetical protein. | Oxidoreductase. | 0.697 |
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