STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBEV_1253Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with equivalent annotation, the initiation predicted by RAST was accepted. (218 aa)    
Predicted Functional Partners:
BBEV_1218
Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with equivalent annotation, the same initiation site was predicted by BASYS and RAST.
 
    0.922
yvbF
Putative HTH-type transcriptional regulator yvbF; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, the annotation from BASYS was retained, the initiation site predicted by RAST was supported by BLASTP against NCBI NR; Belongs to the GbsR family.
  
     0.577
BBEV_1965
Lipoprotein, putative; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, the annotation from RAST was retained, the initiation site predicted by RAST was supported by BLASTP against NCBI NR.
  
     0.527
BBEV_1219
Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with equivalent annotation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR.
  
  
 0.494
BBEV_1252
Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with equivalent annotation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR.
       0.471
BBEV_0023
Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with equivalent annotation, the same initiation site was predicted by BASYS and RAST.
  
     0.462
BBEV_3198
Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with equivalent annotation, the same initiation site was predicted by BASYS and RAST; Belongs to the GbsR family.
  
     0.429
BBEV_1088
Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with equivalent annotation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR.
  
     0.424
BBEV_3223
Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR.
  
     0.416
Your Current Organism:
Bacillus beveridgei
NCBI taxonomy Id: 632773
Other names: B. beveridgei, Bacillus beveridgei Baesman et al. 2010, Bacillus sp. MLTeJB, DSM 22320, strain MLTeJB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.