| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BBEV_1664 | parC | BBEV_1664 | BBEV_1662 | Succinyl-CoA synthetase, alpha subunit-like protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, the annotation from RAST was retained, the same initiation site was predicted by BASYS and RAST. | Topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily. | 0.640 |
| BBEV_1664 | parE | BBEV_1664 | BBEV_1663 | Succinyl-CoA synthetase, alpha subunit-like protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, the annotation from RAST was retained, the same initiation site was predicted by BASYS and RAST. | Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.656 |
| dnaN | gyrA | BBEV_0003 | BBEV_3378 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.647 |
| dnaN | parE | BBEV_0003 | BBEV_1663 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.638 |
| dnaN | recA | BBEV_0003 | BBEV_1760 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.944 |
| dnaN | rpoB | BBEV_0003 | BBEV_3254 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.575 |
| dnaN | rpoC | BBEV_0003 | BBEV_3253 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.581 |
| gltA | gltS | BBEV_1996 | BBEV_2292 | Glutamate synthase [NADPH] large subunit; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | Glutamate synthase (ferredoxin); Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | 0.999 |
| gltA | parE | BBEV_1996 | BBEV_1663 | Glutamate synthase [NADPH] large subunit; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.634 |
| gltA | recA | BBEV_1996 | BBEV_1760 | Glutamate synthase [NADPH] large subunit; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.589 |
| gltA | rpoB | BBEV_1996 | BBEV_3254 | Glutamate synthase [NADPH] large subunit; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.601 |
| gltA | rpoC | BBEV_1996 | BBEV_3253 | Glutamate synthase [NADPH] large subunit; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.658 |
| gltS | gltA | BBEV_2292 | BBEV_1996 | Glutamate synthase (ferredoxin); Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | Glutamate synthase [NADPH] large subunit; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | 0.999 |
| gltS | parE | BBEV_2292 | BBEV_1663 | Glutamate synthase (ferredoxin); Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.634 |
| gltS | recA | BBEV_2292 | BBEV_1760 | Glutamate synthase (ferredoxin); Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.589 |
| gltS | rpoB | BBEV_2292 | BBEV_3254 | Glutamate synthase (ferredoxin); Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.601 |
| gltS | rpoC | BBEV_2292 | BBEV_3253 | Glutamate synthase (ferredoxin); Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.658 |
| gyrA | dnaN | BBEV_3378 | BBEV_0003 | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.647 |
| gyrA | parC | BBEV_3378 | BBEV_1662 | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily. | 0.582 |
| gyrA | parE | BBEV_3378 | BBEV_1663 | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | Topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.989 |