STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mhqD-2Putative hydrolase MhqD; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, the annotation from BASYS was retained, the initiation site predicted by RAST was supported by BLASTP against NCBI NR. (201 aa)    
Predicted Functional Partners:
mhqO
Glyoxalase family protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, the annotation from RAST was retained, the same initiation site was predicted by BASYS and RAST.
  
 0.994
mhqA
Glyoxalase; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the same initiation site was predicted by BASYS and RAST.
    0.882
catE
Glyoxalase family protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, the annotation from RAST was retained, the same initiation site was predicted by BASYS and RAST.
 
  
 0.666
BBEV_2370
Nitrilotriacetate monooxygenase component B; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, the annotation from RAST was retained, the same initiation site was predicted by BASYS and RAST.
 
    0.556
BBEV_3153
Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with conflicting annotation that was resolved by human curation, the same initiation site was predicted by BASYS and RAST.
   
 0.462
BBEV_2601
Hypothetical protein; Automated annotation was performed by BASYS (https://www.basys.ca) and RAST (http://rast.nmpdr.org) then manually curated. The gene product was detected by both BASYS and RAST, with equivalent annotation, the same initiation site was predicted by BASYS and RAST.
       0.411
Your Current Organism:
Bacillus beveridgei
NCBI taxonomy Id: 632773
Other names: B. beveridgei, Bacillus beveridgei Baesman et al. 2010, Bacillus sp. MLTeJB, DSM 22320, strain MLTeJB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.