Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F945_00979 | F945_00980 | GCA_000829675_01586 | GCA_000829675_01585 | Unannotated protein. | Unannotated protein. | 0.494 |
F945_00979 | F945_00981 | GCA_000829675_01586 | GCA_000829675_01584 | Unannotated protein. | Unannotated protein. | 0.494 |
F945_00979 | purL | GCA_000829675_01586 | GCA_000829675_01587 | Unannotated protein. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.441 |
F945_00980 | F945_00979 | GCA_000829675_01585 | GCA_000829675_01586 | Unannotated protein. | Unannotated protein. | 0.494 |
F945_00980 | F945_00981 | GCA_000829675_01585 | GCA_000829675_01584 | Unannotated protein. | Unannotated protein. | 0.773 |
F945_00981 | F945_00979 | GCA_000829675_01584 | GCA_000829675_01586 | Unannotated protein. | Unannotated protein. | 0.494 |
F945_00981 | F945_00980 | GCA_000829675_01584 | GCA_000829675_01585 | Unannotated protein. | Unannotated protein. | 0.773 |
F945_00981 | purL | GCA_000829675_01584 | GCA_000829675_01587 | Unannotated protein. | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.444 |
purL | F945_00979 | GCA_000829675_01587 | GCA_000829675_01586 | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | Unannotated protein. | 0.441 |
purL | F945_00981 | GCA_000829675_01587 | GCA_000829675_01584 | Unannotated protein; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | Unannotated protein. | 0.444 |