STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F945_01137Unannotated protein. (336 aa)    
Predicted Functional Partners:
F945_00138
Unannotated protein.
 
  
 0.785
F945_01136
Unannotated protein.
       0.428
F945_01135
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.428
F945_02002
Unannotated protein.
    
   0.426
F945_03622
Unannotated protein.
    
   0.426
F945_03623
Unannotated protein.
    
   0.426
F945_02183
Unannotated protein.
    
   0.426
F945_02203
Unannotated protein.
    
   0.426
Your Current Organism:
Acinetobacter rudis
NCBI taxonomy Id: 632955
Other names: A. rudis, Acinetobacter rudis Vaz-Moreira et al. 2011, Acinetobacter sp. A1PC16, CCUG 57889, CECT 7818, DSM 24031, LMG 26107, LMG:26107, strain G30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.