Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F945_01701 | F945_01702 | GCA_000829675_03542 | GCA_000829675_03543 | Unannotated protein. | Unannotated protein. | 0.831 |
F945_01701 | F945_01703 | GCA_000829675_03542 | GCA_000829675_03544 | Unannotated protein. | Unannotated protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.463 |
F945_01701 | F945_01705 | GCA_000829675_03542 | GCA_000829675_03546 | Unannotated protein. | Unannotated protein. | 0.450 |
F945_01701 | F945_01706 | GCA_000829675_03542 | GCA_000829675_03547 | Unannotated protein. | Unannotated protein. | 0.450 |
F945_01701 | F945_01707 | GCA_000829675_03542 | GCA_000829675_03548 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.450 |
F945_01701 | cyoE | GCA_000829675_03542 | GCA_000829675_03545 | Unannotated protein. | Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.454 |
F945_01701 | rplI | GCA_000829675_03542 | GCA_000829675_03539 | Unannotated protein. | Unannotated protein; Binds to the 23S rRNA. | 0.657 |
F945_01701 | rpsF | GCA_000829675_03542 | GCA_000829675_03541 | Unannotated protein. | Unannotated protein; Binds together with S18 to 16S ribosomal RNA. | 0.674 |
F945_01701 | rpsR | GCA_000829675_03542 | GCA_000829675_03540 | Unannotated protein. | Unannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.662 |
F945_01702 | F945_01701 | GCA_000829675_03543 | GCA_000829675_03542 | Unannotated protein. | Unannotated protein. | 0.831 |
F945_01702 | F945_01703 | GCA_000829675_03543 | GCA_000829675_03544 | Unannotated protein. | Unannotated protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.497 |
F945_01702 | F945_01705 | GCA_000829675_03543 | GCA_000829675_03546 | Unannotated protein. | Unannotated protein. | 0.465 |
F945_01702 | F945_01706 | GCA_000829675_03543 | GCA_000829675_03547 | Unannotated protein. | Unannotated protein. | 0.465 |
F945_01702 | F945_01707 | GCA_000829675_03543 | GCA_000829675_03548 | Unannotated protein. | Unannotated protein; Belongs to the heme-copper respiratory oxidase family. | 0.479 |
F945_01702 | cyoE | GCA_000829675_03543 | GCA_000829675_03545 | Unannotated protein. | Unannotated protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.465 |
F945_01702 | rplI | GCA_000829675_03543 | GCA_000829675_03539 | Unannotated protein. | Unannotated protein; Binds to the 23S rRNA. | 0.613 |
F945_01702 | rpsF | GCA_000829675_03543 | GCA_000829675_03541 | Unannotated protein. | Unannotated protein; Binds together with S18 to 16S ribosomal RNA. | 0.647 |
F945_01702 | rpsR | GCA_000829675_03543 | GCA_000829675_03540 | Unannotated protein. | Unannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.627 |
F945_01702 | tolB | GCA_000829675_03543 | GCA_000829675_00120 | Unannotated protein. | Unannotated protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.654 |
F945_01703 | F945_01701 | GCA_000829675_03544 | GCA_000829675_03542 | Unannotated protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Unannotated protein. | 0.463 |
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