STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET48053.1Transcriptional regulator, XRE family; Identified by match to protein family HMM PF01381. (118 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.742
EET47019.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06242.
  
     0.727
EET48999.1
Conserved hypothetical protein.
  
     0.626
EET48972.1
Identified by match to protein family HMM PF01936; DUF88.
  
     0.572
nadK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
  
  0.570
nadE
Glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.565
atpF-2
ATP synthase B' chain (Subunit II); Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.558
EET47207.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04296.
 
     0.549
EET49095.1
ATP synthase subunits region ORF 4.
  
     0.549
EET47364.1
HAD-superfamily subfamily IIA hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01459.
  
     0.530
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.