STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET48206.1Myo-inositol catabolism IolB protein; Identified by match to protein family HMM PF06845. (280 aa)    
Predicted Functional Partners:
EET49038.1
PfkB domain protein; Identified by match to protein family HMM PF00294.
 
 
 0.999
EET47707.1
Probable malonic semialdehyde oxidative decarboxylase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
 
 
 0.999
EET48277.1
Fructose-bisphosphate aldolase; Identified by match to protein family HMM PF01116.
 
  
 0.977
EET47012.1
Inositol 2-dehydrogenase; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
 
  
 0.975
EET46306.1
Xylose isomerase domain protein TIM barrel; Identified by match to protein family HMM PF01261.
 
  
 0.972
EET49402.1
Oxidoreductase domain protein; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
 
  
 0.957
EET47299.1
Oxidoreductase domain protein; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
 
  
 0.945
EET46361.1
Fructokinase; Identified by match to protein family HMM PF00294.
  
 
 0.788
EET47846.1
PfkB; Identified by match to protein family HMM PF00294.
  
 
 0.756
EET48090.1
Transcriptional regulator, LacI family; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
 
     0.737
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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