STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET48310.1Flavin monoamine oxidase family protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. (362 aa)    
Predicted Functional Partners:
EET48363.1
Identified by match to protein family HMM PF00850.
    
 0.965
EET49563.1
Histone deacetylase 14; Identified by match to protein family HMM PF00850.
    
 0.965
EET47122.1
Identified by match to protein family HMM PF00850.
    
 0.965
EET47279.1
Conserved hypothetical protein.
 
     0.927
EET47737.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein; Identified by match to protein family HMM PF02826.
    
 0.927
EET48862.1
Helicase domain protein, putative.
    
 0.926
EET47831.1
Aromatic amino acid decarboxylase; Identified by match to protein family HMM PF00282.
    
 0.849
EET49743.1
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
 
     0.810
EET46822.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.773
serA
Phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM TIGR01327; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.662
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.