STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET48647.1Oxidoreductase domain protein; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894. (363 aa)    
Predicted Functional Partners:
EET47634.1
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702.
 
    0.961
EET48009.1
Methanesulfonate sulfonatase; Identified by match to protein family HMM PF00296.
 
     0.920
EET46306.1
Xylose isomerase domain protein TIM barrel; Identified by match to protein family HMM PF01261.
  
 
  0.911
EET48783.1
Oxidoreductase YdhF; Identified by match to protein family HMM PF00248.
 
     0.888
EET48768.1
Tripartite ATP-independent periplasmic transporter DctQ component; Identified by match to protein family HMM PF04290.
 
     0.857
EET49448.1
Trap dicarboxylate transporter- dctp subunit; Identified by match to protein family HMM PF03480.
 
     0.829
EET47821.1
Putative oxidoreductase; Identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894.
  
  
  0.711
EET47707.1
Probable malonic semialdehyde oxidative decarboxylase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
  
  
 0.638
EET49402.1
Oxidoreductase domain protein; Identified by match to protein family HMM PF01408; match to protein family HMM PF02894.
  
  
  0.637
EET48206.1
Myo-inositol catabolism IolB protein; Identified by match to protein family HMM PF06845.
  
  
 0.635
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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