STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET46447.1Ornithine-acyl[acyl carrier protein] N-acyltransferase. (241 aa)    
Predicted Functional Partners:
EET47976.1
Lyso-ornithine lipid acyltransferase; Identified by match to protein family HMM PF01553.
 
  
 0.915
EET49666.1
Identified by match to protein family HMM PF00005.
       0.671
msrB_1
methionine-R-sulfoxide reductase; Identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357.
       0.636
EET49075.1
Conserved hypothetical protein.
  
     0.496
EET48246.1
Conserved hypothetical protein.
 
     0.481
EET46550.1
ATP-dependent protease subunit; Identified by match to protein family HMM PF05673.
  
     0.456
EET48575.1
Lipoprotein, SmpA/OmlA family.
       0.448
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.