STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET47824.1Conserved hypothetical protein. (136 aa)    
Predicted Functional Partners:
EET47333.1
Conserved hypothetical protein.
  
  0.833
EET49490.1
Conserved hypothetical protein.
  
  0.813
EET48864.1
Conserved hypothetical protein.
  
 
   0.715
EET47982.1
Conserved hypothetical protein.
  
 
   0.695
EET46846.1
Conserved hypothetical protein.
  
 
   0.673
EET49288.1
Conserved hypothetical protein.
  
     0.621
EET47928.1
Type I secretion target repeat protein.
  
     0.620
EET49529.1
Identified by match to protein family HMM PF02485.
  
     0.620
EET48808.1
Conserved hypothetical protein.
  
     0.619
EET47006.1
Conserved hypothetical protein.
  
     0.616
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.