STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET49713.1Integral membrane protein, putative; Identified by match to protein family HMM PF00892. (286 aa)    
Predicted Functional Partners:
EET46535.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.773
EET46382.1
Possible transporter, RhaT family, DMT superfamily; Identified by match to protein family HMM PF00892.
  
     0.770
EET47066.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00892.
  
     0.763
EET47141.1
Membrane protein involved in aromatic hydrocarbon degradation.
       0.499
EET46414.1
Outer membrane transporter, ompp1/fadl/todx family.
       0.499
EET48552.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.407
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.