STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET48825.1arginine/histidine-ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (268 aa)    
Predicted Functional Partners:
EET49352.1
Extracellular solute-binding protein family 3; Identified by match to protein family HMM PF00497.
  0.966
EET46834.1
His/Glu/Gln/Arg/opine family ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
   
0.950
EET47853.1
Arginine/ornithine transport ATP-binding protein AotP; Identified by match to protein family HMM PF00005.
 
 
 0.941
EET47063.1
Arginine/ornithine transport ATP-binding protein AotP; Identified by match to protein family HMM PF00005.
 
  
  0.873
EET49644.1
Octopine transport system permease protein OccM; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.870
EET46468.1
Arginine-binding periplasmic protein 1; Identified by match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
  0.826
EET47142.1
L-glutamine synthetase; Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.
       0.746
EET48524.1
Glutamine amidotransferase, class I; Identified by match to protein family HMM PF00117.
       0.608
EET47150.1
Gamma-glutamylputrescine oxidoreductase; Identified by match to protein family HMM PF01266.
       0.587
EET49793.1
Identified by match to protein family HMM PF00120; Belongs to the glutamine synthetase family.
       0.575
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.