STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET48349.1Probable sugar transporter, putative; Identified by match to protein family HMM PF07690. (446 aa)    
Predicted Functional Partners:
EET47757.1
Conserved hypothetical protein.
       0.773
EET48163.1
Beta-xylosidase; Identified by match to protein family HMM PF04616; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.601
EET49369.1
Alpha/beta hydrolase fold-containing protein.
  
    0.530
EET46412.1
Conserved hypothetical protein.
       0.524
EET47000.1
Hypothetical protein; Identified by Glimmer3; putative.
       0.524
EET49425.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07366.
       0.523
hisD_2
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.523
EET49876.1
Conserved hypothetical protein.
  
     0.494
EET46198.1
Lipoprotein.
  
 
 0.469
EET48131.1
Conserved hypothetical protein.
       0.403
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.