STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET46520.1ABC-type antimicrobial peptide transport system, permease component; Identified by match to protein family HMM PF02687. (416 aa)    
Predicted Functional Partners:
EET48737.1
Macrolide export ATP-binding/permease protein MacB; Identified by match to protein family HMM PF00005.
 
 0.992
EET48034.1
Conserved hypothetical protein.
 
     0.953
EET49370.1
Conserved secreted protein.
 
     0.945
EET48624.1
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.933
EET48080.1
Lipoprotein.
 
     0.917
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.859
EET48925.1
Lipoprotein-releasing system ATP-binding protein LolD; Identified by match to protein family HMM PF00005.
 
 0.859
EET48315.1
Lipoprotein-releasing system ATP-binding protein LolD 2; Identified by match to protein family HMM PF00005.
 
 0.854
EET48679.1
Zinc uptake regulation protein; Belongs to the Fur family.
       0.690
EET47745.1
ABC transporter, membrane spanning protein; Identified by match to protein family HMM PF02687.
  
 
 0.454
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.