STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET47982.1Conserved hypothetical protein. (112 aa)    
Predicted Functional Partners:
EET48864.1
Conserved hypothetical protein.
     0.987
EET46846.1
Conserved hypothetical protein.
     0.986
EET47928.1
Type I secretion target repeat protein.
  
 
   0.812
EET47743.1
Type I secretion target repeat protein.
  
 
   0.805
EET49529.1
Identified by match to protein family HMM PF02485.
  
     0.750
EET47333.1
Conserved hypothetical protein.
  
 
   0.742
EET46843.1
EpsK domain protein; Identified by match to protein family HMM PF02485.
  
     0.739
EET48532.1
Conserved hypothetical protein.
  
     0.736
EET49010.1
Hemolysin-type calcium-binding region.
  
 
   0.732
EET49878.1
Conserved hypothetical protein.
  
     0.732
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.