STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EET49094.1Conserved hypothetical protein. (139 aa)    
Predicted Functional Partners:
EET49036.1
Conserved hypothetical protein.
  
     0.636
EET48284.1
Conserved hypothetical protein.
       0.613
EET46278.1
Conserved hypothetical protein.
  
     0.589
EET46215.1
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
  
     0.537
EET46449.1
Heat shock protein DnaJ domain protein; Identified by match to protein family HMM PF00226.
  
     0.502
EET49679.1
HemY domain protein; Identified by match to protein family HMM PF07219.
  
     0.500
EET46941.1
Conserved hypothetical protein.
  
     0.489
EET47313.1
Septum formation initiator; Identified by match to protein family HMM PF04977.
  
     0.462
EET47073.1
MotA/TolQ/ExbB proton channel family protein.
  
     0.455
EET47286.1
Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
     0.437
Your Current Organism:
Thalassobium sp. R2A62
NCBI taxonomy Id: 633131
Other names: T. sp. R2A62, Thalassiobium sp. R2A62, alpha proteobacterium R2A62
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